Stilbene, coumarine and lignin biosynthesis - Reference pathway

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Reference pathway Reference pathway (Reaction) Reference pathway (KO) All organisms in KEGG Homo sapiens (human) Mus musculus (mouse) Rattus norvegicus (rat) Bos taurus (cow) Sus scrofa (pig) Drosophila melanogaster (fruit fly) Caenorhabditis elegans (nematode) Arabidopsis thaliana (thale cress) Cyanidioschyzon merolae Candida albicans Schizosaccharomyces pombe Cryptococcus neoformans JEC21 Dictyostelium discoideum Plasmodium falciparum Cryptosporidium parvum Cryptosporidium hominis Yersinia pestis CO92 Yersinia pestis KIM Yersinia pestis Mediaevails Yersinia pseudotuberculosis Erwinia carotovora Photorhabdus luminescens Haemophilus influenzae (serotype d) Haemophilus influenzae 86-028NP (nontypeable) Haemophilus ducreyi Mannheimia succiniciproducens Xylella fastidiosa 9a5c Xylella fastidiosa Temecula1 Xanthomonas campestris ATCC 33913 Xanthomonas campestris 8004 Xanthomonas axonopodis Xanthomonas oryzae Vibrio cholerae Vibrio fischeri Pseudomonas aeruginosa Pseudomonas putida Pseudomonas syringae B728a Pseudomonas syringae phaseolicola 1448A Pseudomonas fluorescens Pf-5 Pseudomonas fluorescens PfO-1 Acinetobacter sp. ADP1 Shewanella oneidensis Pseudoalteromonas haloplanktis Methylococcus capsulatus Nitrosococcus oceani Hahella chejuensis Chromobacterium violaceum Ralstonia solanacearum Ralstonia eutropha Burkholderia mallei Burkholderia pseudomallei K96243 Burkholderia pseudomallei 1710b Burkholderia thailandensis Burkholderia sp. 383 Nitrosospira multiformis Desulfovibrio vulgaris Hildenborough Bdellovibrio bacteriovorus Pelagibacter ubique Mesorhizobium loti Sinorhizobium meliloti Agrobacterium tumefaciens C58 (UWash/Dupont) Agrobacterium tumefaciens C58 (Cereon) Brucella melitensis Brucella melitensis biovar Abortus Brucella suis Brucella abortus Bradyrhizobium japonicum Rhodopseudomonas palustris CGA009 Nitrobacter winogradskyi Caulobacter crescentus Silicibacter pomeroyi Rhodobacter sphaeroides Rhodospirillum rubrum Bacillus subtilis Bacillus halodurans Bacillus anthracis Ames Bacillus anthracis A2012 Bacillus anthracis Sterne Bacillus cereus ATCC 14579 Bacillus cereus ATCC 10987 Bacillus cereus ZK Bacillus thuringiensis Bacillus licheniformis ATCC 14580 Bacillus licheniformis DSM13 Bacillus clausii Oceanobacillus iheyensis Streptococcus pyogenes MGAS5005 (serotype M1) Streptococcus pyogenes MGAS10394 (serotype M6) Streptococcus pyogenes MGAS6180 (serotype M28) Lactobacillus plantarum Lactobacillus sakei Clostridium tetani E88 Carboxydothermus hydrogenoformans Mycobacterium tuberculosis H37Rv Mycobacterium tuberculosis CDC1551 Mycobacterium bovis Mycobacterium leprae Mycobacterium avium paratuberculosis Corynebacterium glutamicum (Kitasato) Corynebacterium glutamicum (Bielefeld) Corynebacterium efficiens Corynebacterium jeikeium Nocardia farcinica Streptomyces coelicolor Streptomyces avermitilis Thermobifida fusca Symbiobacterium thermophilum Rhodopirellula baltica Synechocystis sp. PCC6803 Synechococcus sp. WH8102 Synechococcus sp. PCC6301 Synechococcus sp. PCC7942 Gloeobacter violaceus Anabaena sp. PCC7120 Anabaena variabilis Prochlorococcus marinus SS120 Prochlorococcus marinus MED4 Prochlorococcus marinus MIT9313 Prochlorococcus marinus NATL2A Salinibacter ruber Chlorobium chlorochromatii Pelodictyon luteolum Thermus thermophilus HB27 Methanococcus jannaschii Methanosarcina barkeri Methanosarcina mazei Methanobacterium thermoautotrophicum Methanosphaera stadtmanae Halobacterium sp. NRC-1 Natronomonas pharaonis     Current selection