TL10_R2.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	TL10_R2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	187577883
Sequences flagged as poor quality	0
Sequence length	151
%GC	51

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
CTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCT	656809	0.35015268831027374	No Hit

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGTAC	43680	0.0	9.044935	9
GGCCATA	49185	0.0	8.02713	2
GCCATAC	48780	0.0	7.955798	3
ACCCTAA	1452385	0.0	7.590493	4
AACCCTA	1467355	0.0	7.525526	3
CCTAACC	1486115	0.0	7.450177	6
CCCTAAC	1497435	0.0	7.4082932	5
TAACCCT	1531210	0.0	7.262849	8
CTAACCC	1614565	0.0	6.9732523	1
ATCGGAA	173870	0.0	6.7391176	1
GGGATCC	76105	0.0	6.119186	3
CATACTA	71370	0.0	5.94196	5
TCGGAAG	210540	0.0	5.670552	2
GGGCCAT	74285	0.0	5.53854	1
TACTAGT	83585	0.0	5.2558017	7
CCATACT	86650	0.0	5.2488513	4
ACTAGTA	83925	0.0	5.165328	8
CGGAAGA	236885	0.0	5.0863223	3